#***************************************************************************************** #* Human-Virus domain-domain interactions between known Hu-Vir protein interaction pairs * #***************************************************************************************** # #Authors: H. R. Rachita (rachita@cdfd.org.in) and H. A. Nagarajaram #Author contact: Dr. H. A. Nagarajaram /Head, Laboratory of Computational Biology, Centre for DNA Fingerprinting and Diagnostics, Hyderabad - 500001, India. #Cite : Rachita Halehalli and H.A.Nagarajaram (2014) "Molecular principles of human virus protein–protein interactions". Bioinformatics (2015) 31 (7): 1025-1033. DOI:10.1093/bioinformatics/btu763 # #column 1: Interactor A (UniProt Acc (Human protein)) #column 2: Interactor B (UniProt Acc (Viral protein)) #column 3: Virus #column 4: Pfam doamin alias in human protein or Interactor A #column 5: Pfam doamin alias in viral protein or Interactor B human_prt viral_prt virus domain_in_human_prt domain_in_viral_prt O00308 Q81013 PHV WW Herpes_LMP2 O00401 P00526 RSV PBD SH3_1 O00401 P00526 RSV WH1 SH3_1 O00571 B2ZJU9 Dengue_virus Helicase_C Flavi_NS5 O00571 P27958 HCV Helicase_C HCV_NS4a O00571 P27958 HCV Helicase_C Peptidase_S29 O00571 P27958 HCV Helicase_C RdRP_3 O00585 P24766 Vaccinia_virus IL8 Orthopox_35kD O15444 P24766 Vaccinia_virus IL8 Orthopox_35kD O60563 P04609 HIV_1 Cyclin_N Tat O60563 P18098 HIV_2 Cyclin_N Tat O60583 P04609 HIV_1 Cyclin_N Tat O60583 P18098 HIV_2 Cyclin_N Tat O94806 P04609 HIV_1 Pkinase Tat O95639 P03496 InfluenzaH1N1 zf-CCCH Flu_NS1 O95793 P21605 Vaccinia_virus dsrm dsrm O95793 P21605 Vaccinia_virus dsrm z-alpha P01375 Q1M1E0 Vaccinia_virus TNF TNFR_c6 P01375 Q8UYL3 Vaccinia_virus TNF TNFR_c6 P01730 P19551 HIV_1 ig GP120 P01730 Q74126 HIV_2 ig GP120 P01857 P04488 HHV_1 C1-set Herpes_gE P01903 P03347 HIV_1 MHC_II_alpha Gag_p24 P02776 P24766 Vaccinia_virus IL8 Orthopox_35kD P04049 P15054 ASV C1_1 SH2 P04049 P15054 ASV Pkinase Pkinase_Tyr P04049 P15054 ASV Pkinase SH2 P04049 P15054 ASV Pkinase SH3_1 P04049 P15054 ASV RBD SH2 P04183 P68563 Vaccinia_virus TK TK P04439 A0MMD8 HIV_1 MHC_I RVT_1 P04439 P03347 HIV_1 MHC_I Gag_p17 P04439 P03347 HIV_1 MHC_I Gag_p24 P04439 P04604 HIV_1 MHC_I F-protein P04439 P19551 HIV_1 MHC_I GP120 P04439 Q74127 HIV_2 MHC_I F-protein P04637 P03070 SV_40 P53 Polyoma_lg_T_C P04637 P03072 JCPyV P53 Polyoma_lg_T_C P05129 P04609 HIV_1 Pkinase Tat P05771 P04609 HIV_1 Pkinase Tat P06239 P04604 HIV_1 SH3_1 F-protein P06239 Q74127 HIV_2 SH3_1 F-protein P06241 P04604 HIV_1 SH3_1 F-protein P06241 P68834 MpyV SH3_1 DnaJ P06241 Q74127 HIV_2 SH3_1 F-protein P06400 P03070 SV_40 Rb_C DnaJ P06400 P03255 HadV_C RB_A Adeno_E1A P06400 P03255 HadV_C RB_B Adeno_E1A P06400 P03255 HadV_C Rb_C Adeno_E1A P06400 P03256 HadV_B RB_A Adeno_E1A P06400 P03256 HadV_B RB_B Adeno_E1A P06400 P03256 HadV_B Rb_C Adeno_E1A P06400 P03259 HadV_A RB_A Adeno_E1A P06400 P03259 HadV_A RB_B Adeno_E1A P06400 P03259 HadV_A Rb_C Adeno_E1A P06400 Q6H1D8 HadV_E RB_A Adeno_E1A P06400 Q6H1D8 HadV_E RB_B Adeno_E1A P06400 Q6H1D8 HadV_E Rb_C Adeno_E1A P06493 P04609 HIV_1 Pkinase Tat P06729 P03347 HIV_1 V-set Gag_p24 P07947 P04604 HIV_1 SH3_1 F-protein P07948 P04604 HIV_1 SH3_1 F-protein P08174 Q80HA4 Echovirus Sushi Rhv P08631 P04604 HIV_1 SH3_1 F-protein P08631 Q74127 HIV_2 SH3_1 F-protein P11802 P04609 HIV_1 Pkinase Tat P11802 Q01043 SaHV_2 Pkinase Cyclin_N P11802 Q01043 SaHV_2 Pkinase Herp-Cyclin P12931 P04604 HIV_1 SH3_1 F-protein P13500 O41925 MuHV_4 IL8 M3 P13747 P04604 HIV_1 MHC_I F-protein P13747 P19551 HIV_1 MHC_I GP120 P13760 P03347 HIV_1 MHC_II_beta Gag_p24 P13762 P03347 HIV_1 MHC_II_beta Gag_p24 P15151 P03301 Poliovirus V-set Rhv P15498 P04604 HIV_1 SH3_1 F-protein P15529 Q9WIY7 Measles_virus Sushi HN P15927 P03070 SV_40 RPA_C T_Ag_DNA_bind P16333 P04604 HIV_1 SH3_1 F-protein P16410 P19551 HIV_1 V-set GP120 P16410 P19551 HIV_1 V-set GP41 P17252 P04609 HIV_1 Pkinase Tat P17612 P04609 HIV_1 Pkinase Tat P17693 P04604 HIV_1 MHC_I F-protein P17693 P19551 HIV_1 MHC_I GP120 P17844 B2ZJU9 Dengue_virus Helicase_C Flavi_NS5 P17844 P14340 Dengue_virus Helicase_C Flavi_DEAD P17844 P14340 Dengue_virus Helicase_C Flavi_glycop_C P17844 P14340 Dengue_virus Helicase_C Flavi_glycoprot P17844 P14340 Dengue_virus Helicase_C Flavi_NS5 P17844 P14340 Dengue_virus Helicase_C FtsJ P17844 P14340 Dengue_virus Helicase_C Peptidase_S7 P17844 P27958 HCV Helicase_C HCV_NS4a P17844 P27958 HCV Helicase_C Peptidase_S29 P17844 P27958 HCV Helicase_C RdRP_3 P17844 Q86538 Dengue_virus Helicase_C Flavi_DEAD P19525 P04609 HIV_1 Pkinase Tat P19525 P18098 HIV_2 Pkinase Tat P19525 P20639 Vaccinia_virus Pkinase S1 P19525 P21605 Vaccinia_virus dsrm dsrm P19525 P21605 Vaccinia_virus dsrm z-alpha P20916 P19551 HIV_1 ig GP120 P20916 P19551 HIV_1 V-set GP120 P20916 P19551 HIV_1 V-set GP41 P20936 P00526 RSV C2 SH2 P20936 P00526 RSV C2 SH3_1 P20936 P00526 RSV PH SH2 P20936 P00526 RSV PH SH3_1 P20936 P00526 RSV RasGAP SH3_1 P20936 P00526 RSV SH2 Pkinase_Tyr P20936 P00526 RSV SH2 SH2 P20936 P00526 RSV SH2 SH3_1 P20936 P00526 RSV SH3_1 Pkinase_Tyr P20936 P00526 RSV SH3_1 SH2 P20936 P00526 RSV SH3_1 SH3_1 P20963 P04604 HIV_1 ITAM F-protein P20963 Q74127 HIV_2 ITAM F-protein P22612 P04609 HIV_1 Pkinase Tat P22681 P08393 HHV_1 Cbl_N2 zf-C3HC4 P22681 P08393 HHV_1 Cbl_N3 zf-C3HC4 P22681 P08393 HHV_1 Cbl_N zf-C3HC4 P22681 P08393 HHV_1 UBA zf-C3HC4 P22681 P08393 HHV_1 zf-C3HC4 zf-C3HC4 P22694 P04609 HIV_1 Pkinase Tat P23284 P03347 HIV_1 Pro_isomerase Gag_p24 P24385 P04609 HIV_1 Cyclin_N Tat P24723 P04609 HIV_1 Pkinase Tat P24864 P04609 HIV_1 Cyclin_N Tat P24941 P04609 HIV_1 Pkinase Tat P24941 P89883 MuHV_4 Pkinase Cyclin_N P27361 P04609 HIV_1 Pkinase Tat P27986 P04604 HIV_1 SH3_1 F-protein P28482 P04609 HIV_1 Pkinase Tat P28749 P03255 HadV_C RB_A Adeno_E1A P28749 P03255 HadV_C RB_B Adeno_E1A P30153 P03070 SV_40 HEAT DnaJ P30154 P03070 SV_40 HEAT DnaJ P30460 P04604 HIV_1 MHC_I F-protein P30460 P19551 HIV_1 MHC_I GP120 P30504 P04604 HIV_1 MHC_I F-protein P30504 P19551 HIV_1 MHC_I GP120 P30511 P04604 HIV_1 MHC_I F-protein P30511 P19551 HIV_1 MHC_I GP120 P31751 P04609 HIV_1 Pkinase Tat P35968 P52585 Orf_virus V-set PDGF P36507 P04609 HIV_1 Pkinase Tat P40189 Q98823 KSHV fn3 IL6 P45983 P04609 HIV_1 Pkinase Tat P49336 P04609 HIV_1 Pkinase Tat P49792 P03347 HIV_1 Pro_isomerase Gag_p24 P49792 P35963 HIV_1 Pro_isomerase Gag_p24 P49841 P04609 HIV_1 Pkinase Tat P50613 P04609 HIV_1 Pkinase Tat P50613 P18098 HIV_2 Pkinase Tat P50750 P04609 HIV_1 Pkinase Tat P50750 P18098 HIV_2 Pkinase Tat P51946 P04609 HIV_1 Cyclin_N Tat P51946 P18098 HIV_2 Cyclin_N Tat P52294 P03428 InfluenzaH1N1 Arm Flu_PB2 P52294 P31345 InfluenzaH3N2 Arm Flu_PB2 P52799 Q9IH62 Nipah_virus Ephrin HN P62937 P03347 HIV_1 Pro_isomerase Gag_p24 P62937 P04590 HIV_2 Pro_isomerase Gag_p24 P62937 P35963 HIV_1 Pro_isomerase Gag_p24 P78310 P36711 HadV_A V-set Adeno_knob P79483 P03347 HIV_1 MHC_II_beta Gag_p24 Q00534 Q01043 SaHV_2 Pkinase Cyclin_N Q00534 Q01043 SaHV_2 Pkinase Herp-Cyclin Q00535 P04609 HIV_1 Pkinase Tat Q02156 P04609 HIV_1 Pkinase Tat Q02750 P04609 HIV_1 Pkinase Tat Q04759 P04609 HIV_1 Pkinase Tat Q05513 P04609 HIV_1 Pkinase Tat Q05655 P04609 HIV_1 Pkinase Tat Q07666 P00526 RSV KH_1 SH2 Q08211 P21605 Vaccinia_virus dsrm dsrm Q08211 P21605 Vaccinia_virus dsrm z-alpha Q08211 P21605 Vaccinia_virus Helicase_C dsrm Q08999 P03255 HadV_C RB_A Adeno_E1A Q08999 P03255 HadV_C RB_B Adeno_E1A Q09472 P03255 HadV_C zf-TAZ Adeno_E1A Q09472 P03259 HadV_A zf-TAZ Adeno_E1A Q13077 P03230 EBV MATH Herpes_LMP1 Q13114 P03230 EBV MATH Herpes_LMP1 Q13554 P04609 HIV_1 Pkinase Tat Q14012 P04609 HIV_1 Pkinase Tat Q14155 P04604 HIV_1 SH3_1 F-protein Q14790 P08160 AcMNPV Peptidase_C14 P35 Q15052 P04604 HIV_1 SH3_1 F-protein Q15139 P04609 HIV_1 Pkinase Tat Q15223 P57083 HHV_1 V-set Herpes_glycop_D Q15369 P05900 HIV_1 Skp1_POZ Vif Q15464 P00526 RSV SH2 Pkinase_Tyr Q15464 P00526 RSV SH2 SH2 Q15464 P00526 RSV SH2 SH3_1 Q16531 Q7M022 HBV CPSF_A X Q30154 P03347 HIV_1 MHC_II_beta Gag_p24 Q71V99 P03347 HIV_1 Pro_isomerase Gag_p24 Q71V99 P04590 HIV_2 Pro_isomerase Gag_p24 Q8TEJ3 P04604 HIV_1 SH3_1 F-protein Q92793 P03255 HadV_C zf-TAZ Adeno_E1A Q92793 P03259 HadV_A zf-TAZ Adeno_E1A Q93009 P08393 HHV_1 MATH zf-C3HC4 Q96CW1 P04604 HIV_1 Adap_comp_sub F-protein Q96CW1 Q74127 HIV_2 Adap_comp_sub F-protein Q96J02 P13285 EBV WW Herpes_LMP2 Q96J02 Q81013 PHV WW Herpes_LMP2 Q96PU5 Q81013 PHV WW Herpes_LMP2 Q99558 P04609 HIV_1 Pkinase Tat Q99816 P03347 HIV_1 UEV Gag_p6 Q9BXS5 P04604 HIV_1 Adap_comp_sub F-protein Q9BXS5 Q74127 HIV_2 Adap_comp_sub F-protein Q9BYF1 P59594 SARS Peptidase_M2 Spike_rec_bind Q9NUL3 P21605 Vaccinia_virus dsrm dsrm Q9NUL3 P21605 Vaccinia_virus dsrm z-alpha Q9NZQ3 P15054 ASV SH3_1 Pkinase_Tyr Q9NZQ3 P15054 ASV SH3_1 SH2 Q9NZQ3 P15054 ASV SH3_1 SH3_1 Q9UQM7 P04609 HIV_1 Pkinase Tat Q9Y243 P04609 HIV_1 Pkinase Tat Q9Y258 P24766 Vaccinia_virus IL8 Orthopox_35kD Q9Y3I1 Q01043 SaHV_2 F-box Cyclin_N Q9Y4K3 Q8V2D1 HHV_5 MATH TNFR_c6 Q9Y6Q5 P04604 HIV_1 Adap_comp_sub F-protein Q9Y6Q5 Q74127 HIV_2 Adap_comp_sub F-protein